Python Library

The TRHarmonizer python library underlies all of the TRTools command line tools and can be used independently of them. See here for a description of what that library does. See here for examples on how to use it in your own code. See here for specifics on how TRHarmonizer parses the outputs of different genotypers. And see here for the API of the python code of both the TRHarmonizer library and the command-line tools.

• The TRHarmonizer Library
• Code Examples
  • TR Utilities
  • TR Harmonization
• TRHarmonizer Library Details
  • Alleles
  • Quality Scores
• Python API
  • trtools.associaTR module
  • trtools.compareSTR module
  • trtools.dumpSTR module
  • trtools.dumpSTR.filters module
  • trtools.mergeSTR module
  • trtools.prancSTR module
  • trtools.qcSTR module
  • trtools.simTR module
  • trtools.statSTR module
  • trtools.utils.common module
  • trtools.utils.mergeutils module
  • trtools.utils.tr_harmonizer module
  • trtools.utils.utils